You can experiment with different props, since they are the determining factor. The 8" 8045 props are quieter than the 9443s many people nowadays run...You can also take steps to remove as much weight as possible. Smaller batteries, lighter parts, fewer accessories. Weight makes a big difference in noise.
Probably not quiet enough to make a difference, but E300 motors help a tiny bit (they are WAY quieter at idle, but in the air it's all props).
The Phantom is a pretty fixed form factor so outside of that there is not much you can do (without getting into frame extensions and slower motors/bigger props).